Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSAOCP00000001260Si:ch211-117l17.7. (676 aa)    
Predicted Functional Partners:
LOC111588741
Glycoprotein IX (platelet).
   
0.969
ENSAOCP00000026694
LRRNT domain-containing protein.
   
 0.942
vwf
Von Willebrand factor.
    
 0.928
ENSAOCP00000001244
LRRCT domain-containing protein.
  
  
 
0.908
cpn1
Carboxypeptidase N, polypeptide 1.
   
 0.741
LRRC30
Leucine rich repeat containing 30.
  
   
 0.543
f2
Prothrombin; Thrombin, which cleaves bonds after Arg and Lys, converts fibrinogen to fibrin and activates factors V, VII, VIII, XIII, and, in complex with thrombomodulin, protein C. Functions in blood homeostasis, inflammation and wound healing; Belongs to the peptidase S1 family.
   
 0.493
LRRC18
Leucine rich repeat containing 18.
  
     0.472
hgfac
HGF activator.
   
 0.441
lrrc2
Uncharacterized protein.
  
     0.435
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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