Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSAOCP00000001267Uncharacterized protein. (203 aa)    
Predicted Functional Partners:
gramd1a
GRAM domain containing 1A.
 
  
   0.869
gramd1c
GRAM domain containing 1c.
 
  
 
 0.866
ENSAOCP00000023739
G_PROTEIN_RECEP_F1_2 domain-containing protein.
   
    0.812
ENSAOCP00000027235
5-hydroxytryptamine (serotonin) receptor 2C, G protein-coupled-like 1.
   
    0.812
gramd1b
GRAM domain containing 1Bb.
 
      0.787
gramd2b
GRAM domain-containing protein.
    
 
 0.757
LOC111571177
GRAM domain-containing protein.
    
 
 0.757
LOC111576734
H6 family homeobox 4.
      
 0.601
tbrg1
Transforming growth factor beta regulator 1.
      
 0.593
garnl3
GTPase activating Rap/RanGAP domain like 3.
      
 0.541
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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