STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111579047Crystallin, gamma MX; Belongs to the beta/gamma-crystallin family. (175 aa)    
Predicted Functional Partners:
cryaa
Crystallin, alpha A; Belongs to the small heat shock protein (HSP20) family.
   
 
 0.712
skp1
S-phase kinase-associated protein 1; Belongs to the SKP1 family.
      
 0.588
LOC111580075
Lens intrinsic membrane protein 2.2.
   
  
 0.582
LOC111571388
Taste receptor, type 1, member 1.
      
 0.558
edar
Ectodysplasin A receptor.
      
 0.483
lgsn
Lengsin, lens protein with glutamine synthetase domain; Belongs to the glutamine synthetase family.
   
  
 0.445
LOC111568175
Growth hormone 1.
   
    0.433
LOC111569181
Somatolactin alpha.
   
    0.433
LOC111581013
Solute carrier family 16 member 12b.
      
 0.416
rnf10
Ring finger protein 10.
      
 0.414
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.