Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC111579047Crystallin, gamma MX; Belongs to the beta/gamma-crystallin family. (175 aa)    
Predicted Functional Partners:
LOC111580075
Lens intrinsic membrane protein 2.2.
      
 0.548
ENSAOCP00000000545
Uncharacterized protein.
      
 0.513
LOC111581013
Solute carrier family 16 member 12b.
      
 0.509
LOC111568175
Growth hormone 1.
   
    0.464
LOC111569181
Somatolactin alpha.
   
    0.464
cpb2
Carboxypeptidase B2 (plasma).
      
 0.434
LOC111569953
Heparan-sulfate 6-O-sulfotransferase; 6-O-sulfation enzyme which catalyzes the transfer of sulfate from 3'-phosphoadenosine 5'-phosphosulfate (PAPS) to position 6 of the N-sulfoglucosamine residue (GlcNS) of heparan sulfate.
      
 0.434
skp1
S-phase kinase-associated protein 1; Belongs to the SKP1 family.
      
 0.433
cryaa
Crystallin, alpha A; Belongs to the small heat shock protein (HSP20) family.
   
 
 0.432
LOC111571388
Taste receptor, type 1, member 1.
      
 0.423
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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