Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC111580112Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family. (304 aa)    
Predicted Functional Partners:
ablim1
Actin binding LIM protein 1a.
      
 0.617
LOC111588582
NME/NM23 family member 8; Belongs to the NDK family.
    
 0.484
LOC111586722
Zgc:136461; Belongs to the peptidase S1 family.
  
 
0.469
LOC111567950
Zgc:112160; Belongs to the peptidase S1 family.
  
 
0.462
LOC111577096
Zgc:171592; Belongs to the peptidase S1 family.
  
 
0.461
LOC111562945
Toll-like receptor 21.
    
 0.460
SUSD2
Sushi domain containing 2.
     
 0.445
agt
Angiotensinogen; Belongs to the serpin family.
   
 0.432
p4hb
Protein disulfide-isomerase.
    
 0.431
LOC111569157
SH2 domain-containing protein.
      
 0.427
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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