STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111573667Prostaglandin E receptor 1c (subtype EP1). (361 aa)    
Predicted Functional Partners:
LOC111564932
Guanine nucleotide binding protein (G protein), alpha 15 (Gq class), tandem duplicate 4.
    
  0.793
LOC111564939
Guanine nucleotide binding protein (G protein), alpha 11a (Gq class).
    
 0.776
LOC111567721
Guanine nucleotide binding protein (G protein), alpha 11b (Gq class).
    
 0.776
LOC111575629
Uncharacterized protein.
    
 0.776
LOC111575571
Guanine nucleotide binding protein (G protein), alpha 14a.
    
 0.776
LOC111585789
Uncharacterized protein.
    
  0.708
LOC111587833
Guanine nucleotide binding protein (G protein), alpha 14.
    
  0.708
ptges2
Prostaglandin E synthase 2-like; Belongs to the GST superfamily.
      
 0.400
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.