STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHRNA1Cholinergic receptor nicotinic alpha 1 subunit. (449 aa)    
Predicted Functional Partners:
LOC111571767
Cholinergic receptor, nicotinic, alpha 4b.
  
0.622
LOC111581148
Uncharacterized protein.
  
0.620
LOC111587155
Cholinergic receptor, nicotinic, alpha 2b (neuronal).
  
0.619
LOC111583546
Cholinergic receptor, nicotinic, alpha 9.
  
0.587
CHRNA9
Cholinergic receptor nicotinic alpha 9 subunit.
  
0.586
LOC111586718
Uncharacterized protein.
  
0.585
ENSAOCP00000017658
Uncharacterized protein.
  
0.584
LOC111579058
Cholinergic receptor, nicotinic, beta polypeptide 3a.
  
0.584
LOC111582308
Cholinergic receptor, nicotinic, beta 3b (neuronal).
  
0.584
chrna5
Cholinergic receptor, nicotinic, alpha 5.
  
0.580
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.