Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
nischNischarin. (1452 aa)    
Predicted Functional Partners:
LOC111586038
Erythropoietin receptor.
      
 0.754
LOC111585248
Stathmin; Belongs to the stathmin family.
      
 0.751
LOC111566758
Phosphoinositide-3-kinase, regulatory subunit 3b (gamma).
    
  0.631
LOC111582380
Phosphoinositide-3-kinase, regulatory subunit 1 (alpha).
    
  0.631
pik3r2
Phosphoinositide-3-kinase, regulatory subunit 2 (beta).
    
  0.631
LOC111569137
Uncharacterized protein.
    
  0.631
brca2
BRCA2 DNA repair associated.
      
 0.630
LOC111575506
Polybromo 1.
      
 0.617
pik3r4
Phosphoinositide-3-kinase, regulatory subunit 4.
    
   0.602
LOC111587052
Uncharacterized protein.
    
  0.570
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
Server load: low (16%) [HD]