Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-expression
Experiments
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[Homology]
Score
LOC111575506Polybromo 1. (1554 aa)    
Predicted Functional Partners:
arid2
AT rich interactive domain 2 (ARID, RFX-like).
   
 0.988
actl6a
Actin-like 6A; Belongs to the actin family.
   
 0.974
brd7
Bromodomain containing 7.
   
 0.973
LOC111568432
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1.
   
 0.971
smarce1
HMG box domain-containing protein.
   
 0.971
bcl7a
BAF chromatin remodeling complex subunit BCL7A.
    
 0.954
phf10
PHD finger protein 10.
    
 0.949
smarcc2
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2.
  
 0.944
smarcc1
Uncharacterized protein.
   
 0.933
LOC111573776
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1b.
   
 0.933
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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