Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
saysd1Si:ch211-59d15.9. (214 aa)    
Predicted Functional Partners:
mcrip1
MAPK regulated corepressor interacting protein 1.
      
 0.759
spp2
Secreted phosphoprotein 2.
      
 0.691
LOC111586760
Calcyphosine-like b.
      
 0.687
LOC111574852
Dehydrogenase/reductase (SDR family) member 7Ca.
      
 0.617
dhrs7c
Dehydrogenase/reductase (SDR family) member 7Cb.
      
 0.617
trmt13
tRNA methyltransferase 13 homolog.
      
 0.616
cunh5orf22
Zgc:56556.
      
 0.615
C21orf62
Chromosome 21 open reading frame 62.
      
 0.610
rad1
RAD1 homolog (S. pombe).
      
 0.522
jade2
Jade family PHD finger 2.
      
 0.519
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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