STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ltbp1Latent transforming growth factor beta binding protein 1. (1405 aa)    
Predicted Functional Partners:
LOC111581736
Transforming growth factor beta; Belongs to the TGF-beta family.
   
 0.777
LOC111576372
Transforming growth factor beta; Belongs to the TGF-beta family.
   
 0.576
tgfb2
Transforming growth factor beta; Belongs to the TGF-beta family.
   
 0.576
itgb6
Integrin beta; Belongs to the integrin beta chain family.
    
 0.549
LOC111568923
Transforming growth factor beta; Belongs to the TGF-beta family.
   
 0.505
LOC111572013
Transforming growth factor beta; Belongs to the TGF-beta family.
   
 0.505
TGFB3
Transforming growth factor beta 3.
   
 0.505
itgb8
Integrin beta; Belongs to the integrin beta chain family.
    
 0.483
LOC111565049
Im:7152348.
   
 0.427
arid4b
Translocase of outer mitochondrial membrane 20.
    
 0.425
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.