Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
acot8Acyl-CoA thioesterase 8. (343 aa)    
Predicted Functional Partners:
scp2
Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.
   
 
 0.970
tysnd1
Trypsin domain containing 1.
   
 
 0.821
eci2
Enoyl-CoA delta isomerase 2.
  
 
 0.806
ephx2
Epoxide hydrolase 2, cytoplasmic.
   
 
 0.803
ENSAOCP00000000109
Peroxisomal biogenesis factor 5-like b.
   
 0.797
pex5
Peroxisomal biogenesis factor 5.
   
 0.797
Pex5l
Peroxisomal biogenesis factor 5-like a.
   
 0.797
acox1
Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.
  
 
 0.795
HADH
Hydroxyacyl-CoA dehydrogenase.
    
 0.770
cryl1
Crystallin, lambda 1.
    
 0.770
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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