STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ankrd29Ankyrin repeat domain 29. (298 aa)    
Predicted Functional Partners:
Tmem241
Transmembrane protein 241.
    
 
 0.592
LOC111565359
SplA/ryanodine receptor domain and SOCS box containing 3a.
     
 0.544
LOC111588193
SplA/ryanodine receptor domain and SOCS box containing 3b.
     
 0.543
LOC111582389
Ankyrin repeat domain 10a.
  
   
 0.543
nfkbia
Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha b.
  
  
  0.537
ANKRD34A
Ankyrin repeat domain 34A.
  
   
 0.528
LOC111577551
Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha a.
  
  
  0.526
cdh22
Cadherin 22; Cadherins are calcium-dependent cell adhesion proteins.
    
 0.509
ENSAOCP00000018881
Cyclin-dependent kinase inhibitor 2C (p18, inhibits CDK4).
  
 
   0.505
LOC111578449
Serine/threonine-protein phosphatase.
    
 0.501
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.