Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LOC111581321Secreted phosphoprotein 1. (366 aa)    
Predicted Functional Partners:
LOC111579516
SPARC-like 1.
      
 0.705
cd44
Link domain-containing protein.
   
 
 0.686
lpar3
Lysophosphatidic acid receptor 3; Belongs to the G-protein coupled receptor 1 family.
      
 0.552
mus81
MUS81 structure-specific endonuclease subunit.
    
 0.547
DDX20
DEAD-box helicase 20.
   
 0.536
fancm
Helicase C-terminal domain-containing protein.
    
 0.524
ENSAOCP00000002808
Helicase ATP-binding domain-containing protein.
    
 0.524
LOC111562990
Uncharacterized protein.
    
 
 0.520
pold2
Polymerase (DNA directed), delta 2, regulatory subunit.
    
 0.518
ENSAOCP00000006683
Uncharacterized protein.
  
   
 0.509
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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