STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111582601Transmembrane 4 L six family member 18. (196 aa)    
Predicted Functional Partners:
LOC111570773
GDNF family receptor alpha-2; Receptor for neurturin. Mediates the NRTN-induced autophosphorylation and activation of the RET receptor. Also able to mediate GDNF signaling through the RET tyrosine kinase receptor.
   
  
 0.693
lrriq1
Uncharacterized protein.
      
 0.688
LOC111563747
Uncharacterized protein.
      
 0.687
LOC111575528
Ig-like domain-containing protein.
      
 0.606
LOC111562526
Uncharacterized protein.
      
 0.598
ENSAOCP00000023990
Uncharacterized protein.
      
 0.589
tspan1
Tetraspanin.
      
 0.540
piwil1
Piwi-like RNA-mediated gene silencing 1; Belongs to the argonaute family.
      
 0.513
LOC111573371
Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.
   
  
 0.511
tank
TBD domain-containing protein.
   
  
 0.503
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
Server load: low (32%) [HD]