STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PPP1CBSerine/threonine-protein phosphatase; Belongs to the PPP phosphatase family. (327 aa)    
Predicted Functional Partners:
rb1
Retinoblastoma 1.
   
 0.960
eif2s1
Eukaryotic translation initiation factor 2, subunit 1 alpha b.
   
 0.958
LOC111562899
Protein phosphatase 1, regulatory (inhibitor) subunit 14Aa.
     
 0.952
ppp1r14a
Protein phosphatase 1, regulatory (inhibitor) subunit 14Ab.
     
 0.952
LOC111586657
Retinoblastoma-like 2 (p130).
   
 0.938
LOC111565883
Myosin, light chain 9a, regulatory.
    
 0.933
WDR33
WD repeat domain 33.
   
 0.931
LOC111585424
WD repeat domain 82.
   
 0.926
LOC111568125
WD_REPEATS_REGION domain-containing protein.
   
 0.926
LOC111588747
Uncharacterized protein.
   
 0.924
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.