STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
rftn2Raftlin family member 2. (437 aa)    
Predicted Functional Partners:
arl6ip6
Uncharacterized protein.
      
 0.698
n6amt1
N-6 adenine-specific DNA methyltransferase 1.
      
 0.691
LOC111587531
Uncharacterized protein.
      
 0.613
LOC111582248
Chloride intracellular channel 3.
      
 0.604
mospd2
Motile sperm domain containing 2.
      
 0.589
OTOP1
Otopetrin 1.
      
 0.547
LOC111581700
Serine dehydratase-like.
      
 0.461
SDS
Serine dehydratase.
      
 0.461
ZNF503
Zinc finger protein 503.
      
 0.417
plbd1
Phospholipase B-like; Putative phospholipase.
      
 0.405
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.