STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slc35a1Solute carrier family 35 member A1. (338 aa)    
Predicted Functional Partners:
sppl3
Signal peptide peptidase 3.
   
  
 0.533
slc35c1
Solute carrier family 35 member C1.
   
  
 0.512
c1galt1c1
C1GALT1-specific chaperone 1.
   
  
 0.444
gne
Glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase.
      
 0.436
slc35b4
Solute carrier family 35 member B4.
      
 0.422
slc35b3
Solute carrier family 35 member B3.
   
  
 0.419
nans
N-acetylneuraminic acid synthase a.
   
  
 0.419
LOC111583259
Uncharacterized protein; Belongs to the glycosyltransferase 29 family.
      
 0.418
siae
Sialic acid acetylesterase.
      
 0.414
SLC35D3
Solute carrier family 35 member D3.
   
  
 0.410
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.