Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
rbbp5Retinoblastoma binding protein 5. (561 aa)    
Predicted Functional Partners:
ash2l
Ash2 like, histone lysine methyltransferase complex subunit.
    
 0.999
ENSAOCP00000027103
Dpy-30 histone methyltransferase complex regulatory subunit.
    
 0.999
Ncoa6
Nucleic_acid_bd domain-containing protein.
    
 0.995
wdr5
WD repeat domain 5.
   
0.990
ENSAOCP00000009893
WD_REPEATS_REGION domain-containing protein.
   
 0.990
LOC111573979
CXXC finger protein 1b.
    
 0.987
LOC111585599
CXXC finger protein 1a.
    
 0.987
men1
Multiple endocrine neoplasia I.
   
 0.985
LOC111585424
WD repeat domain 82.
    
 0.981
LOC111568125
WD_REPEATS_REGION domain-containing protein.
    
 0.981
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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