Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
TTC39CTetratricopeptide repeat domain 39C. (578 aa)    
Predicted Functional Partners:
ttc5
Tetratricopeptide repeat domain 5.
      
 0.642
ttc4
Tetratricopeptide repeat domain 4.
      
 0.617
LOC111581115
Tetratricopeptide repeat domain 9C.
      
 0.617
ttc14
Tetratricopeptide repeat domain 14.
      
 0.609
rab30
RAB30, member RAS oncogene family.
      
 0.514
tmem97
Transmembrane protein 97; Intracellular orphan receptor that binds numerous drugs and which is highly expressed in various proliferating cells. Corresponds to the sigma-2 receptor, which is thought to play important role in regulating cell survival, morphology and differentiation. May play a role as a regulator of cellular cholesterol homeostasis. May function as sterol isomerase. May alter the activity of some cytochrome P450 proteins.
      
 0.513
ttc25
Tetratricopeptide repeat domain 25.
      
 0.427
ttc26
Tetratricopeptide repeat domain 26.
      
 0.423
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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