STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111583822MOB family member 4, phocein. (226 aa)    
Predicted Functional Partners:
fgfr1op2
FGFR1 oncogene partner 2.
    
 
 0.946
slmap
Sarcolemma associated protein a.
    
 
 0.939
LOC111572487
CTTNBP2 N-terminal like a.
    
 
 0.923
LOC111574385
CTTNBP2 N-terminal like b.
    
 
 0.923
gsc
Goosecoid.
    
   0.915
tcp1
T-complex 1.
    
 
 0.908
strip1
Striatin interacting protein 1.
    
 
 0.908
strip2
Striatin interacting protein 2.
    
 
 0.908
LOC111567715
Programmed cell death 10b.
   
 
 0.903
pdcd10
Programmed cell death 10a.
   
 
 0.903
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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