STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSAOCP00000001393Uncharacterized protein. (87 aa)    
Predicted Functional Partners:
cd3e
Ig_4 domain-containing protein.
   
 0.787
sord
Sorbitol dehydrogenase.
  
 
 0.613
cd247
Uncharacterized protein.
   
 0.547
LOC111584730
Retinal G protein coupled receptor a.
    
 
 0.543
LOC111565739
CRAL-TRIO domain-containing protein.
   
 0.542
LOC111565182
Cytochrome P450, family 26, subfamily A, polypeptide 1; Belongs to the cytochrome P450 family.
   
 
 0.542
rlbp1
Retinaldehyde binding protein 1b.
   
 0.531
ttpa
Tocopherol (alpha) transfer protein.
   
  0.525
ttpal
Tocopherol (alpha) transfer protein-like.
   
  0.525
LOC111569154
Cytochrome P450, family 26, subfamily b, polypeptide 1; Belongs to the cytochrome P450 family.
   
 
 0.510
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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