STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111580106Nuclear receptor binding SET domain protein 2. (1211 aa)    
Predicted Functional Partners:
mre11
Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.
   
 0.680
LOC111583696
Tumor protein p53 binding protein, 1.
    
 0.649
eed
Embryonic ectoderm development.
   
 0.648
rad50
RAD50 homolog, double strand break repair protein.
   
 0.636
rps27a
Ribosomal protein S27a.
   
  0.612
atm
Non-specific serine/threonine protein kinase.
   
 0.610
ENSAOCP00000000866
Histone H2A; Belongs to the histone H2A family.
    
  0.595
LOC111567261
Histone H2A; Belongs to the histone H2A family.
    
  0.595
ENSAOCP00000000940
Histone H2A; Belongs to the histone H2A family.
    
  0.595
LOC111570799
Histone H2A; Belongs to the histone H2A family.
    
  0.595
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.