Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC111585216Uncharacterized protein. (618 aa)    
Predicted Functional Partners:
cog6
Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.
   
 0.871
stx16
Syntaxin 16; Belongs to the syntaxin family.
    
 0.855
cog8
Conserved oligomeric Golgi complex subunit 8; Belongs to the COG8 family.
    
 0.830
mon2
MON2 homolog, regulator of endosome-to-Golgi trafficking.
    
 
 0.809
RIC1
RIC1 homolog, RAB6A GEF complex partner 1.
    
  0.762
gbf1
Golgi brefeldin A resistant guanine nucleotide exchange factor 1.
    
 0.762
GCC2
GRIP domain-containing protein.
   
 0.761
vps53
VPS53 subunit of GARP complex.
    
 0.759
arfrp1
ADP-ribosylation factor related protein 1.
    
 0.747
arfgap1
ADP-ribosylation factor GTPase activating protein 1.
    
 0.743
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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