Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
chchd5Uncharacterized protein. (107 aa)    
Predicted Functional Partners:
suox
Sulfite oxidase.
    
   0.914
ENSAOCP00000000663
Zgc:153920.
      
 0.507
LOC111565098
Coiled-coil-helix-coiled-coil-helix domain containing 4a.
    
 0.505
rundc1
RUN domain containing 1.
      
 0.463
LOC111564569
Eukaryotic translation initiation factor 1B.
   
  
 0.460
pex11g
Peroxisomal biogenesis factor 11 gamma.
      
 0.423
dtwd1
DTW domain containing 1.
      
 0.422
chchd3
MICOS complex subunit; Component of the MICOS complex, a large protein complex of the mitochondrial inner membrane that plays crucial roles in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane.
     
 0.419
ing1
Inhibitor of growth protein.
   
  
 0.411
ENSAOCP00000009596
Uncharacterized protein.
      
 0.407
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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