STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111582597Uncharacterized protein; Belongs to the tropomyosin family. (356 aa)    
Predicted Functional Partners:
tnnt2
Troponin T type 2a (cardiac).
   
 0.957
ENSAOCP00000024264
Uncharacterized protein.
   
 0.957
LOC111564126
Troponin T type 2b (cardiac).
   
 0.957
LOC111587057
Actin alpha 1, skeletal muscle.
   
 0.946
actc1
Zgc:86709.
   
 0.946
ACTA1-2
Actin alpha 1, skeletal muscle.
   
 0.946
LOC111584990
Myosin, light chain 1, alkali; skeletal, fast.
   
 0.790
LOC111564128
Troponin I type 1b (skeletal, slow).
   
 0.599
LOC111573861
Troponin I type 1a (skeletal, slow).
   
 0.599
ENSAOCP00000005297
Troponin T2c, cardiac.
   
 0.596
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.