Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC111562660Uncharacterized protein. (474 aa)    
Predicted Functional Partners:
sys1
Protein SYS1 homolog; Involved in protein trafficking. Belongs to the SYS1 family.
     
 0.615
LOC111585760
C-C motif chemokine.
      
 0.593
LOC111562878
Uncharacterized protein.
      
 0.548
lyz
Lysozyme; Lysozymes have primarily a bacteriolytic function; those in tissues and body fluids are associated with the monocyte-macrophage system and enhance the activity of immunoagents. Belongs to the glycosyl hydrolase 22 family.
   
 
 0.543
LOC111580057
Peptidase S1 domain-containing protein.
   
 
 0.523
LOC111567785
Integrin beta; Belongs to the integrin beta chain family.
   
 
  0.496
LOC111563530
Integrin beta; Belongs to the integrin beta chain family.
   
 
  0.496
LOC111588445
Integrin beta.
   
 
  0.496
ENSAOCP00000011442
Uncharacterized protein.
   
 
 0.465
leap2
Liver-expressed antimicrobial peptide 2.
      
 0.465
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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