Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC111585204NOP14 nucleolar protein homolog (yeast). (870 aa)    
Predicted Functional Partners:
wdr46
WD repeat domain 46.
   
 0.991
LOC111586857
UTP20 small subunit processome component.
   
 0.988
noc4l
Nucleolar complex associated 4 homolog.
   
 0.987
bysl
Bystin-like.
   
 0.985
utp4
UTP4 small subunit processome component.
   
 0.984
utp18
Uncharacterized protein.
   
 0.984
pdcd11
Programmed cell death 11.
   
 0.983
bms1
BMS1 ribosome biogenesis factor.
   
 0.983
mphosph10
U3 small nucleolar ribonucleoprotein protein MPP10; Component of the 60-80S U3 small nucleolar ribonucleoprotein (U3 snoRNP). Required for the early cleavages during pre-18S ribosomal RNA processing; Belongs to the MPP10 family.
   
 0.982
utp3
UTP3 small subunit processome component.
   
 0.982
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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