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The next version of STRING is ready for use in your analyses: updated networks across STRING newly available directed regulatory networks a new typed view showing functional, physical, and regulatory edges in one network new clustering options and cluster-based layouts … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fastkFas-activated serine/threonine kinase. (937 aa)    
Predicted Functional Partners:
fastkd2
FAST kinase domains 2.
      
 0.601
JMY-2
Junction mediating and regulatory protein, p53 cofactor.
      
 0.554
fastkd1
FAST kinase domains 1.
      
 0.510
dnajc25
DnaJ (Hsp40) homolog, subfamily C, member 25.
      
 0.441
ndufs2
NADH:ubiquinone oxidoreductase core subunit S2; Belongs to the complex I 49 kDa subunit family.
   
  
 0.440
psmd3
Proteasome 26S subunit, non-ATPase 3.
  
  
 0.437
ENSAOCP00000025751
Receptor-interacting serine-threonine kinase 3; Belongs to the protein kinase superfamily.
   
  
 0.434
ND6
NADH-ubiquinone oxidoreductase chain 6; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.
      
 0.426
LOC111588481
Uncharacterized protein.
    
 
 0.424
inpp5d
Inositol polyphosphate-5-phosphatase D.
   
  
 0.418
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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