STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111573696DSN1 component of MIS12 kinetochore complex. (339 aa)    
Predicted Functional Partners:
nsl1
NSL1 component of MIS12 kinetochore complex.
   
 0.996
LOC111576506
Si:dkey-6i22.5.
    
 0.995
mis12
MIS12 kinetochore complex component.
    
 0.993
nuf2
UF2 component of NDC80 kinetochore complex.
   
 0.968
spc24
SPC24 component of NDC80 kinetochore complex.
   
 0.961
ndc80
NDC80 kinetochore complex component.
   
 0.960
Knl1
Uncharacterized protein.
    
 0.934
spc25
SPC25 component of NDC80 kinetochore complex.
   
 0.929
bub1
Uncharacterized protein.
   
 0.890
LOC111582620
Uncharacterized protein.
   
 0.808
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.