STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cfap57Cilia and flagella associated protein 57. (1168 aa)    
Predicted Functional Partners:
ENSAOCP00000027790
Uncharacterized protein.
   
    0.632
lrguk
Leucine-rich repeats and guanylate kinase domain containing.
    
 0.525
rsph14
Uncharacterized protein.
   
 
 0.524
ENSAOCP00000004147
TSNAXIP1_N domain-containing protein.
   
 0.519
ccdc146
Uncharacterized protein.
    
 0.483
cfap74
Calcium channel, voltage-dependent, L type, alpha 1D subunit, b.
    
 
 0.479
cfap161
Cilia and flagella associated protein 161.
   
 0.465
dnaaf1
Dynein assembly factor 1, axonemal.
    
 0.458
ENSAOCP00000022751
Leucine rich repeat containing 6.
    
 0.451
rsph10b
Radial spoke head 10 homolog B.
    
 
 0.438
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.