STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
xab2XPA binding protein 2. (850 aa)    
Predicted Functional Partners:
snw1
SNW domain containing 1.
   
 0.999
rbm22
RNA binding motif protein 22.
   
 0.999
aqr
Aquarius intron-binding spliceosomal factor.
   
 0.999
bud31
BUD31 homolog.
    
 0.999
crnkl1
Crooked neck pre-mRNA splicing factor 1.
   
0.999
LOC111571426
ISY1 splicing factor homolog.
    
 0.999
prpf19
Pre-mRNA processing factor 19.
   
 0.999
snrpa1
Small nuclear ribonucleoprotein polypeptide A.
   
 
 0.997
cdc40
Cell division cycle 40 homolog (S. cerevisiae).
    
 
 0.997
cdc5l
CDC5 cell division cycle 5-like (S. pombe).
   
 
 0.997
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.