Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSAOCP00000001465Uncharacterized protein. (111 aa)    
Predicted Functional Partners:
pde9a
Phosphodiesterase 9A; Belongs to the cyclic nucleotide phosphodiesterase family.
    
 
 0.616
ENSAOCP00000020627
Phosphodiesterase 9A like; Belongs to the cyclic nucleotide phosphodiesterase family.
    
 
 0.616
phyh
Phytanoyl-CoA 2-hydroxylase.
    
 
 0.515
ENSAOCP00000028419
Uncharacterized protein.
    
   0.481
LIMD1
LIM domains containing 1.
    
   0.481
LOC111573214
Phosphodiesterase.
    
 
 0.472
LOC111564175
Phosphodiesterase.
    
 
 0.472
tma16
Translation machinery associated 16 homolog.
      
 0.471
kif15
Kinesin family member 15; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
   0.468
LOC111564182
CD99 molecule-like 2.
      
 0.408
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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