Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
brcc3BRCA1/BRCA2-containing complex, subunit 3. (265 aa)    
Predicted Functional Partners:
babam1
BRISC and BRCA1 A complex member 1.
    
 0.999
Abraxas2
Abraxas 2, BRISC complex subunit.
    
 0.999
babam2
BRISC and BRCA1 A complex member 2.
    
 0.999
brca1
Uncharacterized protein.
    
 0.993
bard1
BRCA1 associated RING domain 1.
   
 0.989
psmd6
Proteasome 26S subunit, non-ATPase 6.
   
 0.979
psmc1
Proteasome 26S subunit, ATPase 1b; Belongs to the AAA ATPase family.
   
 0.972
psmd13
Proteasome 26S subunit, non-ATPase 13.
   
 0.970
psmc3
Proteasome 26S subunit, ATPase 3; Belongs to the AAA ATPase family.
  
 0.970
psma3
Proteasome subunit alpha type.
   
 0.969
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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