STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rps15aRibosomal protein S15a; Belongs to the universal ribosomal protein uS8 family. (130 aa)    
Predicted Functional Partners:
fau
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.999
rps3
Ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
  
 0.992
rps15
Ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
  
 0.992
rps18
Ribosomal protein S18; Belongs to the universal ribosomal protein uS13 family.
  
 0.992
rps11
Ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family.
  
 0.992
rps2
Ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.
  
 0.991
RPS20
Ribosomal protein S20.
  
 0.991
rps16
Ribosomal protein S16.
  
 0.991
rps28
Ribosomal protein S28.
   
 0.991
RPS29
Ribosomal protein S29.
  
 0.991
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.