STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111577161Cytochrome b-245 light chain; Critical component of the membrane-bound oxidase of phagocytes that generates superoxide. Associates with NOX3 to form a functional NADPH oxidase constitutively generating superoxide. (185 aa)    
Predicted Functional Partners:
LOC111573332
Cytochrome b-245, beta polypeptide (chronic granulomatous disease).
   
 0.985
ncf1
Neutrophil cytosolic factor 1.
   
 0.977
NOX4
NADPH oxidase 4.
   
 0.946
ncf4
Neutrophil cytosolic factor 4.
   
 0.912
LOC111565313
Neutrophil cytosolic factor 2.
   
 0.890
LOC111578427
NADPH oxidase activator 1.
   
 0.890
xk
XK-related protein.
   
 0.836
LOC111573934
XK-related protein.
   
 0.836
LOC111573938
NADPH oxidase 1.
   
 0.836
noxo1
NADPH oxidase organizer 1a.
    
 0.825
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.