STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSAOCP00000001523DDE_3 domain-containing protein. (132 aa)    
Predicted Functional Partners:
LOC111586476
Chromo domain-containing protein.
   
 0.752
CDYL2
Chromodomain Y like 2.
   
 0.752
LOC111568781
Chromodomain protein, Y-like.
   
 0.752
mphosph8
M-phase phosphoprotein 8.
    
 0.592
ddb1
Damage-specific DNA binding protein 1.
    
 
 0.575
LOC111575770
Uncharacterized protein.
    
   0.574
appl2
Adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2.
    
   0.574
LOC111567353
Adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1.
    
   0.574
ENSAOCP00000021429
Uncharacterized protein.
  
 
  0.537
ENSAOCP00000001686
Uncharacterized protein.
  
 
  0.490
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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