Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
slc38a10Solute carrier family 38 member 10. (735 aa)    
Predicted Functional Partners:
spon2
Spondin 2b, extracellular matrix protein.
      
 0.829
fam163b
Family with sequence similarity 163 member B, genome duplicate a.
      
 0.786
nrde2
NRDE-2, necessary for RNA interference, domain containing.
      
 0.777
gnl2
Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily.
      
 0.773
chchd7
Coiled-coil-helix-coiled-coil-helix domain containing 7.
      
 0.760
neto1
Neuropilin (NRP) and tolloid (TLL)-like 1, like.
   
  
 0.754
lmf1
Lipase maturation factor; Involved in the maturation of specific proteins in the endoplasmic reticulum; Belongs to the lipase maturation factor family.
      
 0.718
FAM163B
Family with sequence similarity 163 member B.
      
 0.705
galk2
Galactokinase 2.
      
 0.613
slc38a9
Solute carrier family 38 member 9.
      
 0.613
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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