STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cacul1CDK2 associated cullin domain 1; Belongs to the cullin family. (211 aa)    
Predicted Functional Partners:
ubxn7
UBX domain protein 7.
   
 0.986
skp1
S-phase kinase-associated protein 1; Belongs to the SKP1 family.
   
 0.941
fbxw11
F-box and WD repeat domain containing 11a.
   
 0.934
skp2
S-phase kinase-associated protein 2, E3 ubiquitin protein ligase.
    
 0.881
LOC111581378
Lysine (K)-specific demethylase 2Ba.
    
 0.851
kdm2a
Lysine (K)-specific demethylase 2Ab.
    
 0.851
ENSAOCP00000008302
Uncharacterized protein.
    
 0.851
ENSAOCP00000008341
Lysine (K)-specific demethylase 2Bb.
    
 0.851
LOC111568501
Uncharacterized protein.
    
 0.851
LOC111563044
Zgc:158376.
    
 0.851
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.