STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NDUFAF8NADH:ubiquinone oxidoreductase complex assembly factor 8. (87 aa)    
Predicted Functional Partners:
ndufaf5
NADH:ubiquinone oxidoreductase complex assembly factor 5.
   
 
 0.714
arglu1
Arginine and glutamate rich 1a.
      
 0.656
ndufs5
NADH:ubiquinone oxidoreductase subunit S5.
      
 0.557
ndufaf3
NADH:ubiquinone oxidoreductase complex assembly factor.
      
 0.517
miga2
Mitoguardin 2.
      
 0.433
ndufaf6
NADH:ubiquinone oxidoreductase complex assembly factor 6.
      
 0.418
LOC111564649
ATP synthase subunit d, mitochondrial; Mitochondrial membrane ATP synthase (F(1)F(0) ATP synthase or Complex V) produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain. F-type ATPases consist of two structural domains, F(1) - containing the extramembraneous catalytic core, and F(0) - containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the cent [...]
      
 0.418
LOC111583510
ATP synthase peripheral stalk subunit d.
      
 0.418
APOO
MICOS complex subunit; Component of the MICOS complex, a large protein complex of the mitochondrial inner membrane that plays crucial roles in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane.
      
 0.416
foxred1
FAD-dependent oxidoreductase domain containing 1.
      
 0.416
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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