Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
def8Differentially expressed in FDCP 8 homolog. (442 aa)    
Predicted Functional Partners:
tcf25
Transcription factor 25 (basic helix-loop-helix).
      
 0.861
LOC111586983
SAM domain, SH3 domain and nuclear localisation signals 1a.
   
  
 0.712
mthfsd
Methenyltetrahydrofolate synthetase domain containing.
      
 0.705
LOC111583437
SH3 domain-containing protein.
      
 0.705
pdcd5
Programmed cell death 5.
      
 0.705
mc1r
Melanocyte-stimulating hormone receptor; Receptor for MSH (alpha, beta and gamma) and ACTH. The activity of this receptor is mediated by G proteins which activate adenylate cyclase; Belongs to the G-protein coupled receptor 1 family.
      
 0.693
rrbp1
Ribosome binding protein 1a.
      
 0.691
LOC111588859
Melanocortin 5b receptor.
      
 0.689
uvrag
UV radiation resistance associated gene.
    
 
 0.665
vps9d1
VPS9 domain containing 1.
      
 0.633
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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