STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC1115650122OG-FeII_Oxy_2 domain-containing protein. (307 aa)    
Predicted Functional Partners:
fto
FTO alpha-ketoglutarate dependent dioxygenase.
     
 0.681
trmt6
tRNA methyltransferase 6.
   
  
 0.448
alkbh2
AlkB homolog 2, alpha-ketoglutarate-dependent dioxygenase.
      
 0.447
mettl4
Methyltransferase like 4; Belongs to the MT-A70-like family.
   
  
 0.443
alkbh5
AlkB homolog 5, RNA demethylase.
      
 0.443
jmjd4
Jumonji domain containing 4.
   
  
 0.441
n6amt1
N-6 adenine-specific DNA methyltransferase 1.
   
  
 0.431
alkbh6
AlkB homolog 6.
   
  
 0.430
alkbh8
AlkB homolog 8, tRNA methyltransferase.
      
 0.426
alkbh7
AlkB homolog 7.
      
 0.424
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.