Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSAOCP00000001562Uncharacterized protein. (143 aa)    
Predicted Functional Partners:
ENSAOCP00000020466
Formin homology 2 domain containing 3b.
 
      0.899
LOC111576693
FH2 domain-containing protein.
 
      0.894
ENSAOCP00000012895
Formin homology 2 domain containing 1.
 
      0.565
ENSAOCP00000030690
Usher syndrome 1C.
      
 0.414
cdc23
CDC23 (cell division cycle 23, yeast, homolog).
    
 
 0.409
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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