Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
afg1lAFG1 like ATPase b. (506 aa)    
Predicted Functional Partners:
gucd1
Guanylyl cyclase domain containing 1.
      
 0.612
upb1
Ureidopropionase, beta.
      
 0.610
dtnbp1
Dystrobrevin binding protein 1b.
      
 0.544
mrps9
Mitochondrial ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.
  
   0.538
dmgdh
Dimethylglycine dehydrogenase.
      
 0.529
ice2
Interactor of little elongator complex ELL subunit 2.
      
 0.513
SUSD2
Sushi domain containing 2.
      
 0.490
sec63
SEC63 homolog, protein translocation regulator.
      
 0.486
clpp
ATP-dependent Clp protease proteolytic subunit.
   
 
 0.475
mkln1
Muskelin 1, intracellular mediator containing kelch motifs.
      
 0.467
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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