Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC111568435Amino_oxidase domain-containing protein. (616 aa)    
Predicted Functional Partners:
LOC111575111
Lecithin retinol acyltransferase b, tandem duplicate 1.
     
 0.950
dhrs3
Dehydrogenase/reductase (SDR family) member 3b; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
    
 0.928
LOC111567481
Dehydrogenase/reductase (SDR family) member 4.
  
 
 0.920
LOC111564848
Cytochrome P450, family 27, subfamily C, polypeptide 1; Belongs to the cytochrome P450 family.
    
 0.912
LOC111565182
Cytochrome P450, family 26, subfamily A, polypeptide 1; Belongs to the cytochrome P450 family.
  
 
 0.912
LOC111582918
LRAT domain-containing protein.
     
 0.910
sdr16c5
Short chain dehydrogenase/reductase family 16C, member 5a; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
    
 0.908
LOC111574248
Retinol saturase (all-trans-retinol 13,14-reductase).
  
  
 
0.902
LOC111579233
Si:ch1073-13h15.3.
  
  
 
0.901
DGAT1
O-acyltransferase.
     
  0.900
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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