STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111585197Arrestin domain containing 1a. (454 aa)    
Predicted Functional Partners:
txn
Thioredoxin; Belongs to the thioredoxin family.
    
 0.644
ENSAOCP00000030503
Thioredoxin; Belongs to the thioredoxin family.
    
 0.644
LOC111588582
NME/NM23 family member 8; Belongs to the NDK family.
    
 0.540
LOC111584379
Zgc:123278.
    
 
 0.524
tsg101
Tumor susceptibility 101a.
    
 
 0.524
ENSAOCP00000023449
Uncharacterized protein.
    
 0.490
wwp1
WW domain containing E3 ubiquitin protein ligase 1.
    
 
 0.487
LOC111572524
E3 ubiquitin-protein ligase.
    
 
 0.487
nedd4
NEDD4 E3 ubiquitin protein ligase a.
    
 
 0.465
nedd4l
NEDD4 like E3 ubiquitin protein ligase.
    
 
 0.465
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.