STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111573638Tetraspanin. (315 aa)    
Predicted Functional Partners:
LOC111578656
Tetraspanin.
  
  
 
0.901
cd63
Tetraspanin.
    
 
0.580
LOC111569482
CD4-1 molecule.
    
 0.566
LOC111581641
Cytochrome b5 domain containing 2; Belongs to the cytochrome b5 family.
      
 0.510
igsf8
Immunoglobulin superfamily, member 8.
    
 
 0.476
CD9
Tetraspanin.
   
 
0.455
LOC111571949
Tetraspanin.
   
 
0.455
cd8a
Ig-like domain-containing protein.
      
 0.446
tspan3
Tetraspanin.
      
0.414
LOC111587591
Tetraspanin.
      
0.414
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.