Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
efcab2Uncharacterized protein. (129 aa)    
Predicted Functional Partners:
galnt2
Polypeptide N-acetylgalactosaminyltransferase.
      
 0.822
ENSAOCP00000012818
Zgc:113436.
   
 
 0.798
efhb
EF-hand domain family, member B.
   
 
 0.794
ccm2
CCM2 scaffold protein.
    
 
 0.774
efhc2
EF-hand domain (C-terminal) containing 2.
   
 
 0.767
efcab1
EF-hand calcium binding domain 1.
   
 0.749
tax1bp1
Tax1 (human T-cell leukemia virus type I) binding protein 1b.
    
 0.737
morn3
MORN repeat containing 3.
    
 
 0.722
LOC111578012
Zona pellucida glycoprotein 3d tandem duplicate 2.
      
 0.699
LOC111584934
Zona pellucida glycoprotein 3f, tandem duplicate 1.
      
 0.685
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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