Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
mthfsdMethenyltetrahydrofolate synthetase domain containing. (473 aa)    
Predicted Functional Partners:
snu13
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
   
    0.919
smim12
Small integral membrane protein 12.
   
    0.918
utp15
UTP15 small subunit processome component.
   
    0.918
nop56
Uncharacterized protein.
   
    0.894
rpp38
Ribonuclease P/MRP 38 subunit.
   
    0.796
LOC111564745
Nipsnap homolog 2.
   
    0.782
nipsnap1
Nipsnap homolog 1 (C. elegans).
   
    0.782
NIPSNAP2
NIPSNAP domain-containing protein.
   
    0.782
LOC111577933
Anti-silencing function 1Ba histone chaperone.
   
    0.779
LOC111573655
Anti-silencing function 1Ba histone chaperone.
   
    0.779
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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