STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111577803Pleckstrin homology domain containing, family A member 7a. (1371 aa)    
Predicted Functional Partners:
rps27a
Ribosomal protein S27a.
    
 0.631
lats1
Large tumor suppressor kinase 1.
    
 0.581
lats2
Large tumor suppressor kinase 2.
    
 0.581
uba52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
 0.542
LOC111566873
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
 0.542
birc6
Baculoviral IAP repeat containing 6.
    
 0.508
LOC111585014
Intersectin 2b.
    
  0.503
ENSAOCP00000012646
Uncharacterized protein.
    
  0.503
ENSAOCP00000016650
EH domain-containing protein.
    
  0.503
LOC111574951
Uncharacterized protein.
    
  0.503
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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