Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
tp53i11Tumor protein p53 inducible protein 11b. (189 aa)    
Predicted Functional Partners:
PRDM15
PR/SET domain 15.
      
 0.685
cmc2
COX assembly mitochondrial protein.
      
 0.685
ift81
Intraflagellar transport 81 homolog.
      
 0.617
bok
BCL2 family apoptosis regulator BOK a.
      
 0.617
rrbp1
Ribosome binding protein 1a.
      
 0.595
nup62
Nsp1_C domain-containing protein.
      
 0.554
tspan18
Tetraspanin.
      
 0.544
LOC111568736
Tetraspanin.
      
 0.544
gdap1
Ganglioside induced differentiation associated protein 1; Belongs to the GST superfamily.
      
 0.515
LOC111588485
Metallophosphoesterase domain containing 2a.
      
 0.515
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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